3H5F

Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION6.5293200 mM MgCl2, 50% PEG 200, pH 6.5, VAPOR DIFFUSION, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.244.17

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 77.827α = 90
b = 29.244β = 118.8
c = 44.46γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray93CCDMAR CCD2007-07-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-D1.00001APS21-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.865098.30.05940.1893.571217471
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.861.931000.2113.7748

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2jgo1.8624.47121746534498.260.2020.1990.255RANDOM28.08
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.10.14-0.040.08
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.394
r_dihedral_angle_3_deg14.585
r_scangle_it3.898
r_dihedral_angle_1_deg3.825
r_scbond_it3.248
r_angle_refined_deg1.62
r_mcangle_it1.465
r_mcbond_it1.248
r_angle_other_deg0.913
r_mcbond_other0.344
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.394
r_dihedral_angle_3_deg14.585
r_scangle_it3.898
r_dihedral_angle_1_deg3.825
r_scbond_it3.248
r_angle_refined_deg1.62
r_mcangle_it1.465
r_mcbond_it1.248
r_angle_other_deg0.913
r_mcbond_other0.344
r_xyhbond_nbd_refined0.292
r_nbd_refined0.279
r_symmetry_vdw_refined0.249
r_symmetry_hbond_refined0.199
r_nbd_other0.195
r_symmetry_metal_ion_refined0.195
r_metal_ion_refined0.193
r_nbtor_refined0.183
r_symmetry_vdw_other0.181
r_nbtor_other0.13
r_chiral_restr0.099
r_bond_refined_d0.019
r_gen_planes_refined0.006
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms708
Nucleic Acid Atoms
Solvent Atoms70
Heterogen Atoms11

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction