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Crystal structure of a snoal-like protein of unknown function (bth_ii0226) from burkholderia thailandensis e264 at 1.60 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 277 27.6000% polyethylene glycol 6000, 0.1M MES pH 5.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 1.98 37.81
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.746 α = 90 b = 73.399 β = 90 c = 97.049 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat mirror (vertical focusing) 2009-02-22 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.91837,0.97889,0.97833 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 29.424 96.1 0.041 10.17 29144 -3 23.594
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.66 85.1 0.563 1.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.6 29.424 29133 1478 98.82 0.18 0.179 0.189 0.202 0.2156 RANDOM 19.436
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.58 0.53 0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.202 r_dihedral_angle_3_deg 13.921 r_dihedral_angle_4_deg 11.819 r_scangle_it 6.26 r_scbond_it 4.934 r_dihedral_angle_1_deg 4.787 r_mcangle_it 2.954 r_mcbond_it 1.969 r_angle_refined_deg 1.656 r_angle_other_deg 0.846
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.202 r_dihedral_angle_3_deg 13.921 r_dihedral_angle_4_deg 11.819 r_scangle_it 6.26 r_scbond_it 4.934 r_dihedral_angle_1_deg 4.787 r_mcangle_it 2.954 r_mcbond_it 1.969 r_angle_refined_deg 1.656 r_angle_other_deg 0.846 r_mcbond_other 0.768 r_chiral_restr 0.084 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1867 Nucleic Acid Atoms Solvent Atoms 171 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building XSCALE data scaling PDB_EXTRACT data extraction XDS data reduction SHELXD phasing autoSHARP phasing