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Crystal structure of putative acetyltransferase (YP_001815201.1) from EXIGUOBACTERIUM SP. 255-15 at 1.52 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9 277 3.2M ammonium sulfate, 0.1M Bicine pH 9.0, Additive: 0.001 M acetyl Co-enzyme A, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.37 48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.85 α = 90 b = 66.43 β = 90 c = 87.73 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 Vertical focusing mirror 2008-07-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-1 SSRL BL9-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.52 27.146 98.8 0.044 12.44 3.97 25437 -3 15.026
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.52 1.57 98.3 0.443 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.52 27.146 25434 1301 99.74 0.161 0.16 0.178 0.2516 RANDOM 25.342
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.19 0.17 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.478 r_dihedral_angle_4_deg 18.213 r_dihedral_angle_3_deg 11.677 r_dihedral_angle_1_deg 5.05 r_scangle_it 5.012 r_scbond_it 3.669 r_mcangle_it 2.432 r_mcbond_it 1.844 r_angle_refined_deg 1.339 r_angle_other_deg 0.801
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.478 r_dihedral_angle_4_deg 18.213 r_dihedral_angle_3_deg 11.677 r_dihedral_angle_1_deg 5.05 r_scangle_it 5.012 r_scbond_it 3.669 r_mcangle_it 2.432 r_mcbond_it 1.844 r_angle_refined_deg 1.339 r_angle_other_deg 0.801 r_mcbond_other 0.363 r_symmetry_vdw_other 0.277 r_nbd_refined 0.211 r_symmetry_vdw_refined 0.193 r_nbd_other 0.186 r_nbtor_refined 0.177 r_symmetry_hbond_refined 0.177 r_xyhbond_nbd_refined 0.137 r_nbtor_other 0.081 r_chiral_restr 0.077 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1174 Nucleic Acid Atoms Solvent Atoms 137 Heterogen Atoms 80
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SOLVE phasing MolProbity model building XSCALE data scaling PDB_EXTRACT data extraction XDS data reduction