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Staph. aureus DHFR complexed with NADPH and AR-102
Crystallization Crystal Properties Matthews coefficient Solvent content 2.68 54.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.093 α = 90 b = 79.093 β = 90 c = 107.781 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate mirrors M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 97.3 10357
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.34 83.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 20 9842 487 97.31 0.22404 0.22084 0.2262 0.28901 0.2869 RANDOM 36.928
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.74 -0.37 -0.74 1.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.915 r_dihedral_angle_4_deg 20.908 r_dihedral_angle_3_deg 20.038 r_dihedral_angle_1_deg 11.329 r_mcangle_it 1.1 r_angle_refined_deg 1.086 r_mcbond_it 0.933 r_angle_other_deg 0.846 r_scangle_it 0.788 r_symmetry_hbond_refined 0.556
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.915 r_dihedral_angle_4_deg 20.908 r_dihedral_angle_3_deg 20.038 r_dihedral_angle_1_deg 11.329 r_mcangle_it 1.1 r_angle_refined_deg 1.086 r_mcbond_it 0.933 r_angle_other_deg 0.846 r_scangle_it 0.788 r_symmetry_hbond_refined 0.556 r_scbond_it 0.513 r_symmetry_vdw_other 0.466 r_symmetry_vdw_refined 0.388 r_nbd_other 0.266 r_xyhbond_nbd_refined 0.247 r_nbd_refined 0.24 r_nbtor_refined 0.202 r_mcbond_other 0.12 r_nbtor_other 0.094 r_chiral_restr 0.051 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_gen_planes_other 0.002 r_bond_other_d r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1282 Nucleic Acid Atoms Solvent Atoms 91 Heterogen Atoms 74
Software Software Software Name Purpose HKL-2000 data collection AMoRE phasing REFMAC refinement DENZO data reduction SCALA data scaling