☰ Navigation Tabs
Crystal Structure of Staph. aureus DHFR complexed with NADPH and AR-101
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 25% PEG3350, 200mM NaCl, 100mM bis-Tris, pH5.5
Crystal Properties Matthews coefficient Solvent content 2.74 55.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.567 α = 90 b = 79.567 β = 90 c = 108.958 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate mirrors 2007-11-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 93.8 0.167 0.167 10269 10269 4.1 4.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.2 20 9373 480 90.62 0.25534 0.25124 0.2551 0.3354 0.3318 RANDOM 15.908
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.08 -0.04 -0.08 0.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.384 r_dihedral_angle_4_deg 21.994 r_dihedral_angle_3_deg 21.213 r_dihedral_angle_1_deg 11.01 r_angle_refined_deg 1.593 r_mcangle_it 1.19 r_mcbond_it 0.949 r_angle_other_deg 0.944 r_scangle_it 0.942 r_scbond_it 0.626
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.384 r_dihedral_angle_4_deg 21.994 r_dihedral_angle_3_deg 21.213 r_dihedral_angle_1_deg 11.01 r_angle_refined_deg 1.593 r_mcangle_it 1.19 r_mcbond_it 0.949 r_angle_other_deg 0.944 r_scangle_it 0.942 r_scbond_it 0.626 r_symmetry_vdw_refined 0.483 r_symmetry_hbond_refined 0.365 r_symmetry_vdw_other 0.302 r_nbd_refined 0.3 r_xyhbond_nbd_refined 0.293 r_nbd_other 0.278 r_nbtor_refined 0.205 r_mcbond_other 0.148 r_nbtor_other 0.096 r_xyhbond_nbd_other 0.096 r_chiral_restr 0.072 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d r_gen_planes_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1273 Nucleic Acid Atoms Solvent Atoms 157 Heterogen Atoms 74
Software Software Software Name Purpose HKL-2000 data collection XFIT data reduction REFMAC refinement DENZO data reduction SCALA data scaling