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Melanocarpus albomyces laccase crystal soaked (20 min) with 2,6-dimethoxyphenol
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 298 15 % PMME 2000, 0,2 M ammonium sulphate, 0,1 M sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.46 49.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 174.12 α = 90 b = 60.23 β = 98.36 c = 117.13 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD mirrors M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 1 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 20 95.6 0.094 7.5 2 77891 77891 18.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 94 0.273 3.6 2 10334
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 19.61 77891 73996 3895 100 0.23546 0.23546 0.23047 0.2907 0.33003 0.2915 RANDOM 13.896
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.94 0.44 -1.97 3.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.037 r_dihedral_angle_4_deg 19.3 r_dihedral_angle_3_deg 18.188 r_dihedral_angle_1_deg 8.839 r_scangle_it 4.233 r_scbond_it 3.316 r_angle_refined_deg 2.719 r_mcangle_it 1.975 r_mcbond_it 1.379 r_nbtor_refined 0.335
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.037 r_dihedral_angle_4_deg 19.3 r_dihedral_angle_3_deg 18.188 r_dihedral_angle_1_deg 8.839 r_scangle_it 4.233 r_scbond_it 3.316 r_angle_refined_deg 2.719 r_mcangle_it 1.975 r_mcbond_it 1.379 r_nbtor_refined 0.335 r_nbd_refined 0.303 r_symmetry_vdw_refined 0.279 r_xyhbond_nbd_refined 0.275 r_symmetry_hbond_refined 0.255 r_chiral_restr 0.172 r_metal_ion_refined 0.132 r_bond_refined_d 0.03 r_gen_planes_refined 0.013 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8738 Nucleic Acid Atoms Solvent Atoms 700 Heterogen Atoms 254
Software Software Software Name Purpose MOLREP phasing REFMAC refinement XDS data reduction XSCALE data scaling