X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52980.1M HEPES pH 7.5, 25% PEG 3350, vapor diffusion, hanging drop, temperature 298K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 20.63α = 90
b = 4.7β = 92.28
c = 21.009γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152008-10-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 24-ID-E0.9792APS24-ID-E

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.590950.1895.2742742-312.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.51.6286.50.3922.22.8134

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.520.987397794.50.1490.1480.158RANDOM4.184
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.21-0.140.28-0.08
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg52.825
r_dihedral_angle_3_deg7.731
r_dihedral_angle_1_deg6.407
r_angle_refined_deg1.124
r_scangle_it1.011
r_angle_other_deg0.687
r_mcangle_it0.645
r_scbond_it0.618
r_mcbond_it0.433
r_mcbond_other0.101
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg52.825
r_dihedral_angle_3_deg7.731
r_dihedral_angle_1_deg6.407
r_angle_refined_deg1.124
r_scangle_it1.011
r_angle_other_deg0.687
r_mcangle_it0.645
r_scbond_it0.618
r_mcbond_it0.433
r_mcbond_other0.101
r_chiral_restr0.052
r_bond_refined_d0.006
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms53
Nucleic Acid Atoms
Solvent Atoms5
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
ADSCdata collection