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The Structure of Sarcoplasmic Reticulum Ca2+-ATPase Bound To Cyclopiazonic and ADP
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2OA0
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.1 284 2.75-3% PEG3350, 25% GLYCEROL, 20mM MGCL2, 0.1mM EGTA, 20mM MES, pH 6.1, VAPOR DIFFUSION, temperature 284K
Crystal Properties Matthews coefficient Solvent content 4.24 71.01
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.34 α = 90 b = 96.5 β = 94.84 c = 155.13 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-05-26 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 315 2005-08-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.11587 ALS 8.3.1 2 SYNCHROTRON ALS BEAMLINE 8.2.2 1.0 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 3.2 40 98.9 4 30131 2 93
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 3.2 3.3 98.8 1.6 3 2653
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 2OA0 3.2 24.891 1.99 30110 1532 99.07 0.223 0.222 0.2183 0.241 0.2332 141.139
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.981 1.355 3.002 -2.021
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 21.895 f_angle_d 1.255 f_chiral_restr 0.092 f_bond_d 0.01 f_plane_restr 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7671 Nucleic Acid Atoms Solvent Atoms 10 Heterogen Atoms 54
Software Software Software Name Purpose ADSC data collection PHENIX model building PHENIX refinement XDS data reduction XSCALE data scaling PHENIX phasing