3FH2

The crystal structure of the PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) from Corynebacterium glutamicum


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.628925.5% PEG4000, 0.085M Na Citrate, 0.17M Ammonium acetate, 15% glycerol, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
2.1642.98

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 33.231α = 90
b = 60.83β = 90
c = 68.767γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315mirrors2008-11-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.9794APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.634.3899.20.0830.18.718037178932210
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.64291.630.3172.696.51374

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.634.38180371789397199.20.191090.188940.23105RANDOM9.507
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.22-1.32.52
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.667
r_dihedral_angle_4_deg17.727
r_dihedral_angle_3_deg13.03
r_dihedral_angle_1_deg6.324
r_scangle_it5.399
r_scbond_it3.385
r_mcangle_it1.803
r_angle_refined_deg1.792
r_mcbond_it1.118
r_angle_other_deg1.083
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.667
r_dihedral_angle_4_deg17.727
r_dihedral_angle_3_deg13.03
r_dihedral_angle_1_deg6.324
r_scangle_it5.399
r_scbond_it3.385
r_mcangle_it1.803
r_angle_refined_deg1.792
r_mcbond_it1.118
r_angle_other_deg1.083
r_mcbond_other0.371
r_chiral_restr0.111
r_bond_refined_d0.02
r_gen_planes_refined0.009
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1130
Nucleic Acid Atoms
Solvent Atoms131
Heterogen Atoms

Software

Software
Software NamePurpose
SBC-Collectdata collection
HKL-3000phasing
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling