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Crystal structure of ZU5-ANK, the spectrin binding region of human erythroid ankyrin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 283 20% PEG 4000, 0.25 M KBr, 10 mM DTT, 0.1 M MES pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 283K
Crystal Properties Matthews coefficient Solvent content 2.15 42.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.04 α = 90 b = 204.11 β = 113.14 c = 43.07 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2008-02-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 0.91841 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 40.8 99.6 4.4 40191 40191
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.09 97.9 4.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 36.91 38127 38127 2013 99.62 0.21799 0.21799 0.21554 0.2241 0.26428 0.2675 RANDOM 19.427
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.79 1.79 -1.22 -0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.637 r_dihedral_angle_4_deg 18.247 r_dihedral_angle_3_deg 14.763 r_dihedral_angle_1_deg 6.008 r_scangle_it 2.728 r_mcangle_it 1.939 r_scbond_it 1.805 r_angle_refined_deg 1.205 r_mcbond_it 1.067 r_angle_other_deg 0.774
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.637 r_dihedral_angle_4_deg 18.247 r_dihedral_angle_3_deg 14.763 r_dihedral_angle_1_deg 6.008 r_scangle_it 2.728 r_mcangle_it 1.939 r_scbond_it 1.805 r_angle_refined_deg 1.205 r_mcbond_it 1.067 r_angle_other_deg 0.774 r_mcbond_other 0.151 r_chiral_restr 0.068 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4729 Nucleic Acid Atoms Solvent Atoms 190 Heterogen Atoms 18
Software Software Software Name Purpose MAR345 data collection SHARP phasing REFMAC refinement XDS data reduction SCALA data scaling