X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION42910.95M citric acid, 1.9M ammonium sulfate, pH4, EVAPORATION, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
3.1861.37

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 126.218α = 90
b = 126.218β = 90
c = 299.274γ = 120
Symmetry
Space GroupP 61

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray1002007-08-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X251NSLSX25

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.733098.70.0769.366820
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.7312.80188.40.4351.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.733066785355698.810.23610.233880.278RANDOM72.42
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.07-0.53-1.071.6
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg42.388
r_dihedral_angle_3_deg19.69
r_dihedral_angle_4_deg18.7
r_dihedral_angle_1_deg4.711
r_scangle_it3.145
r_scbond_it1.977
r_mcangle_it1.291
r_angle_refined_deg1.279
r_angle_other_deg0.947
r_mcbond_it0.618
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg42.388
r_dihedral_angle_3_deg19.69
r_dihedral_angle_4_deg18.7
r_dihedral_angle_1_deg4.711
r_scangle_it3.145
r_scbond_it1.977
r_mcangle_it1.291
r_angle_refined_deg1.279
r_angle_other_deg0.947
r_mcbond_it0.618
r_symmetry_vdw_other0.323
r_symmetry_vdw_refined0.237
r_nbd_refined0.23
r_symmetry_hbond_refined0.217
r_xyhbond_nbd_refined0.206
r_nbd_other0.186
r_nbtor_refined0.185
r_mcbond_other0.172
r_nbtor_other0.089
r_xyhbond_nbd_other0.076
r_chiral_restr0.074
r_bond_refined_d0.016
r_gen_planes_refined0.004
r_gen_planes_other0.004
r_bond_other_d0.003
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms13688
Nucleic Acid Atoms
Solvent Atoms177
Heterogen Atoms68

Software

Software
Software NamePurpose
ADSCdata collection
SOLVEphasing
REFMACrefinement
HKL-2000data reduction
SCALAdata scaling