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Structure of the tetragonal crystal form of X (ADRP) domain from FCoV
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 292 ammonium sulfate, MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 5.766374 78.669434
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 161.13 α = 90 b = 161.13 β = 90 c = 98.29 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-07-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.97926 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 50 99.1 26271 26025 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.01 3.19 98.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.1 24.66 22625 22625 1225 99.52 0.20228 0.20014 0.1958 0.24203 0.2331 RANDOM 61.261
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.947 r_dihedral_angle_4_deg 21.527 r_dihedral_angle_3_deg 20.027 r_dihedral_angle_1_deg 6.579 r_scangle_it 2.381 r_angle_refined_deg 1.573 r_scbond_it 1.323 r_mcangle_it 1.054 r_mcbond_it 0.541 r_chiral_restr 0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.947 r_dihedral_angle_4_deg 21.527 r_dihedral_angle_3_deg 20.027 r_dihedral_angle_1_deg 6.579 r_scangle_it 2.381 r_angle_refined_deg 1.573 r_scbond_it 1.323 r_mcangle_it 1.054 r_mcbond_it 0.541 r_chiral_restr 0.1 r_bond_refined_d 0.014 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3887 Nucleic Acid Atoms Solvent Atoms 79 Heterogen Atoms 64
Software Software Software Name Purpose XDS data scaling MOLREP phasing REFMAC refinement XDS data reduction SCALA data scaling