3ET5

Structure of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Complexed with tungstate


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
18.540% PEG 4000, 0.1 M TRIS-HCL, 0.2 M MAGNESIUM CHLORIDE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K, pH 8.50
Crystal Properties
Matthews coefficientSolvent content
1.9336.24

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.848α = 90
b = 65.848β = 90
c = 101.893γ = 90
Symmetry
Space GroupP 42 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray173CCDNOIR-12005-08-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 4.2.2ALS4.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1246.5699.70.1179.17.0715761
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.071000.4163.87.13

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT242.31573778399.70.1850.1820.225RANDOM19.21
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.32-0.320.63
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.035
r_dihedral_angle_4_deg18.1
r_dihedral_angle_3_deg14.741
r_dihedral_angle_1_deg5.961
r_scangle_it2.375
r_scbond_it1.635
r_angle_refined_deg1.313
r_mcangle_it0.895
r_mcbond_it0.597
r_nbtor_refined0.303
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.035
r_dihedral_angle_4_deg18.1
r_dihedral_angle_3_deg14.741
r_dihedral_angle_1_deg5.961
r_scangle_it2.375
r_scbond_it1.635
r_angle_refined_deg1.313
r_mcangle_it0.895
r_mcbond_it0.597
r_nbtor_refined0.303
r_nbd_refined0.204
r_symmetry_hbond_refined0.19
r_symmetry_vdw_refined0.174
r_xyhbond_nbd_refined0.126
r_chiral_restr0.093
r_bond_refined_d0.013
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1916
Nucleic Acid Atoms
Solvent Atoms142
Heterogen Atoms13

Software

Software
Software NamePurpose
SOLVEphasing
REFMACrefinement
d*TREKdata reduction
d*TREKdata scaling