X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.52770.4M Ammonium dihydrogen phosphate, 0.1M TRIS pH 8.5, 35 %(v/v) MPD , VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
Crystal Properties
Matthews coefficientSolvent content
2.2445.07

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 46.08α = 90
b = 46.08β = 90
c = 135.61γ = 120
Symmetry
Space GroupP 31 1 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mmDouble crystal monochromator with 2 sets of mirrors2008-05-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.21.00849, 0.91841, 0.97968BESSY14.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.619.7499.239816

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMIRASTHROUGHOUT2.611.6347155241000.231490.22720.27009RANDOM32.731
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.220.110.22-0.33
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.012
r_dihedral_angle_3_deg18.243
r_dihedral_angle_4_deg14.092
r_dihedral_angle_1_deg6.261
r_scangle_it1.843
r_angle_refined_deg1.107
r_scbond_it1.04
r_mcangle_it0.842
r_angle_other_deg0.824
r_mcbond_it0.446
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.012
r_dihedral_angle_3_deg18.243
r_dihedral_angle_4_deg14.092
r_dihedral_angle_1_deg6.261
r_scangle_it1.843
r_angle_refined_deg1.107
r_scbond_it1.04
r_mcangle_it0.842
r_angle_other_deg0.824
r_mcbond_it0.446
r_chiral_restr0.068
r_mcbond_other0.062
r_bond_refined_d0.009
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1080
Nucleic Acid Atoms
Solvent Atoms9
Heterogen Atoms9

Software

Software
Software NamePurpose
XDSdata scaling
autoSHARPphasing
REFMACrefinement
XDSdata reduction
XSCALEdata scaling