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OCPA complexed CprK (C200S)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 277 200mM sodium chloride, 100mM sodium acetate, 20% PEG 6000, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.45 49.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.141 α = 90 b = 117.17 β = 94.65 c = 84.876 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.83 19.21 0.074 7.5 99029 88661
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.83 19.21 88661 88661 4666 97.09 0.18467 0.18244 0.1872 0.22664 0.2303 RANDOM 21.702
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.06 -0.39 -0.02 -0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.449 r_dihedral_angle_3_deg 13.911 r_dihedral_angle_4_deg 12.436 r_dihedral_angle_1_deg 6.045 r_scangle_it 4.286 r_scbond_it 2.92 r_angle_refined_deg 1.903 r_mcangle_it 1.654 r_angle_other_deg 1.074 r_mcbond_it 1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.449 r_dihedral_angle_3_deg 13.911 r_dihedral_angle_4_deg 12.436 r_dihedral_angle_1_deg 6.045 r_scangle_it 4.286 r_scbond_it 2.92 r_angle_refined_deg 1.903 r_mcangle_it 1.654 r_angle_other_deg 1.074 r_mcbond_it 1 r_mcbond_other 0.354 r_symmetry_vdw_other 0.321 r_symmetry_vdw_refined 0.259 r_nbd_refined 0.221 r_nbd_other 0.193 r_symmetry_hbond_refined 0.181 r_nbtor_refined 0.18 r_xyhbond_nbd_refined 0.179 r_chiral_restr 0.111 r_nbtor_other 0.086 r_xyhbond_nbd_other 0.04 r_bond_refined_d 0.023 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6954 Nucleic Acid Atoms Solvent Atoms 804 Heterogen Atoms 76
Software Software Software Name Purpose REFMAC refinement