X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.22773% MPD, 10mM potassium chloride, 0.1M sodium Hepes, 1.86M ammonium sulfate, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.6453.43

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 46.956α = 90
b = 89.036β = 88.23
c = 84.182γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDBRUKER SMART 60002008-05-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEENRAF-NONIUS FR5911.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.260225132

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2EXX2.7201763889297.090.260810.260220.27267RANDOM17.867
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.41-0.70.21.25
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.447
r_dihedral_angle_3_deg22.578
r_dihedral_angle_4_deg18.635
r_dihedral_angle_1_deg10.811
r_scangle_it3.667
r_scbond_it2.78
r_mcangle_it2.144
r_angle_refined_deg2.043
r_mcbond_it1.523
r_chiral_restr0.455
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.447
r_dihedral_angle_3_deg22.578
r_dihedral_angle_4_deg18.635
r_dihedral_angle_1_deg10.811
r_scangle_it3.667
r_scbond_it2.78
r_mcangle_it2.144
r_angle_refined_deg2.043
r_mcbond_it1.523
r_chiral_restr0.455
r_nbtor_refined0.325
r_nbd_refined0.283
r_xyhbond_nbd_refined0.281
r_symmetry_vdw_refined0.242
r_symmetry_hbond_refined0.15
r_bond_refined_d0.024
r_gen_planes_refined0.01
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4605
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
MOLREPphasing