3D7W

Mistletoe Lectin I in Complex with Zeatin

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	LIQUID DIFFUSION	2.5	293	counter diffusion under microgravity conditions during JAXA-GCF-flight number 6, pH 2.5, LIQUID DIFFUSION, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
4.41	72.72

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 106.644	α = 90
b = 106.644	β = 90
c = 311.667	γ = 120

Symmetry
Space Group	P 65 2 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MAR CCD 165 mm		2006-05-08	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	EMBL/DESY, HAMBURG BEAMLINE X13	0.8073	EMBL/DESY, HAMBURG	X13

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.49	20		0.075	3.9	10.6	37722	37504			43.1

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.49				0.62

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	PDB ENTRY 1M2T	2.49	10	35020	1858	99.95	0.18388	0.18181	0.22379	RANDOM	45.959

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
1.65	0.83		1.65		-2.48

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	38.361
r_dihedral_angle_4_deg	20.83
r_dihedral_angle_3_deg	18.149
r_dihedral_angle_1_deg	8.585
r_scangle_it	4.889
r_scbond_it	3.187
r_mcangle_it	2.134
r_angle_refined_deg	2.082
r_mcbond_it	1.193
r_nbtor_refined	0.326
r_symmetry_hbond_refined	0.296
r_nbd_refined	0.262
r_symmetry_vdw_refined	0.195
r_xyhbond_nbd_refined	0.192
r_chiral_restr	0.136
r_bond_refined_d	0.022
r_gen_planes_refined	0.008

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3927
Nucleic Acid Atoms
Solvent Atoms	282
Heterogen Atoms	150

Software

Software
Software Name	Purpose
REFMAC	refinement