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The Crystal Structure of the C-terminal region of Death Associated Protein 5(DAP5)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 Microbatch under oil 6 293 100mM MMT (D,L Maleic acid, MES and Tris) pH=6,
and 20% PEG 1,500, Microbatch under oil, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.18 43.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.059 α = 90 b = 45.734 β = 103.81 c = 63.357 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 0.97873, 0.91840 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 25 100 0.068 0.065 47.8 7.5 27035
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 1.97 100 0.33 0.32 5.8 7.5 2682
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.9 25 27016 1357 99.91 0.214 0.211 0.2109 0.259 0.2586 RANDOM 30.001
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.84 -0.35 1.25 -0.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.836 r_dihedral_angle_4_deg 21.204 r_dihedral_angle_3_deg 17.241 r_scangle_it 6.12 r_dihedral_angle_1_deg 5.971 r_scbond_it 3.939 r_mcangle_it 2.465 r_angle_refined_deg 2.152 r_mcbond_it 1.432 r_chiral_restr 0.178
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.836 r_dihedral_angle_4_deg 21.204 r_dihedral_angle_3_deg 17.241 r_scangle_it 6.12 r_dihedral_angle_1_deg 5.971 r_scbond_it 3.939 r_mcangle_it 2.465 r_angle_refined_deg 2.152 r_mcbond_it 1.432 r_chiral_restr 0.178 r_bond_refined_d 0.028 r_gen_planes_refined 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2649 Nucleic Acid Atoms Solvent Atoms 65 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction