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Azide complex of Engineered Subtilisin SUBT_BACAM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 l8% PEG 8K, 0.2 M ZnAc, 0.1 M Na Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.18 43.49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.29 α = 90 b = 72.84 β = 90 c = 95.02 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE RIGAKU RAXIS IV mirrors 2007-05-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 15.87 99.8 0.034 26.6 5.59 29142
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 98.3 0.152 7 4.31 2836
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.8 8 28807 1463 99.82 0.208 0.205 0.212 0.262 0.2606 RANDOM 24.423
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.45 -1.14 -0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.387 r_dihedral_angle_3_deg 15.05 r_dihedral_angle_1_deg 6.565 r_dihedral_angle_4_deg 5.472 r_scangle_it 4.127 r_scbond_it 2.936 r_mcangle_it 1.808 r_angle_refined_deg 1.709 r_mcbond_it 1.192 r_symmetry_vdw_refined 0.452
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.387 r_dihedral_angle_3_deg 15.05 r_dihedral_angle_1_deg 6.565 r_dihedral_angle_4_deg 5.472 r_scangle_it 4.127 r_scbond_it 2.936 r_mcangle_it 1.808 r_angle_refined_deg 1.709 r_mcbond_it 1.192 r_symmetry_vdw_refined 0.452 r_symmetry_hbond_refined 0.334 r_nbtor_refined 0.299 r_nbd_refined 0.217 r_xyhbond_nbd_refined 0.197 r_chiral_restr 0.135 r_symmetry_metal_ion_refined 0.104 r_metal_ion_refined 0.02 r_bond_refined_d 0.019 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2394 Nucleic Acid Atoms Solvent Atoms 293 Heterogen Atoms 7
Software Software Software Name Purpose d*TREK data scaling d*TREK data reduction REFMAC refinement PDB_EXTRACT data extraction