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Iodide derivative of human LFABP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 8 293 30% PEG MME 2000, 0.15M KBr, pH 8.0, hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.22 44.63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.352 α = 90 b = 57.07 β = 90 c = 74.892 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate mirrors 2009-09-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.73 50 94.1 0.082 8.7 7.1 13416 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.73 1.79 86.5 0.648 6.6 1228
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.73 8 13213 1309 94.34 0.215 0.2086 0.2748 0.2512 RANDOM 20.2442
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.46 -0.82 -0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.995 r_dihedral_angle_3_deg 13.78 r_dihedral_angle_4_deg 7.142 r_dihedral_angle_1_deg 5.783 r_scangle_it 1.976 r_scbond_it 1.179 r_angle_refined_deg 1.094 r_mcangle_it 0.824 r_mcbond_it 0.466 r_nbtor_refined 0.299
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.995 r_dihedral_angle_3_deg 13.78 r_dihedral_angle_4_deg 7.142 r_dihedral_angle_1_deg 5.783 r_scangle_it 1.976 r_scbond_it 1.179 r_angle_refined_deg 1.094 r_mcangle_it 0.824 r_mcbond_it 0.466 r_nbtor_refined 0.299 r_nbd_refined 0.183 r_symmetry_hbond_refined 0.157 r_symmetry_vdw_refined 0.114 r_xyhbond_nbd_refined 0.097 r_chiral_restr 0.074 r_bond_refined_d 0.007 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 997 Nucleic Acid Atoms Solvent Atoms 208 Heterogen Atoms 41
Software Software Software Name Purpose SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction MAR345dtb data collection HKL-2000 data reduction HKL-2000 data scaling