Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
3.5 A structure of fragment I from E. coli 5S RRNA
X-RAY DIFFRACTION
Crystallization
Crystalization Experiments
ID
Method
pH
Temperature
Details
1
VAPOR DIFFUSION
6.4
pH 6.40, VAPOR DIFFUSION
Crystal Properties
Matthews coefficient
Solvent content
3.14
59
Crystal Data
Unit Cell
Length ( Å )
Angle ( ˚ )
a = 58.67
α = 90
b = 58.67
β = 90
c = 248.84
γ = 120
Symmetry
Space Group
P 61 2 2
Diffraction
Diffraction Experiment
ID #
Crystal ID
Scattering Type
Data Collection Temperature
Detector
Detector Type
Details
Collection Date
Monochromator
Protocol
1
1
x-ray
100
IMAGE PLATE
FUJI
SILICON 111 BENDING MIRROR
1996-04-30
M
SINGLE WAVELENGTH
Radiation Source
ID #
Source
Type
Wavelength List
Synchrotron Site
Beamline
1
SYNCHROTRON
NSLS BEAMLINE X4A
NSLS
X4A
Data Collection
Overall
ID #
Resolution (High)
Resolution (Low)
Percent Possible (Observed)
R Merge I (Observed)
R Sym I (Observed)
Net I Over Average Sigma (I)
Redundancy
Number Reflections (All)
Number Reflections (Observed)
Observed Criterion Sigma (F)
Observed Criterion Sigma (I)
B (Isotropic) From Wilson Plot
1
3.5
20
99.1
0.057
0.057
11.3
4.9
6037
-3
-3
56.6
Highest Resolution Shell
ID #
Resolution (High)
Resolution (Low)
Percent Possible (All)
Percent Possible (Observed)
R Merge I (Observed)
R-Sym I (Observed)
Mean I Over Sigma (Observed)
Redundancy
Number Unique Reflections (All)
3.5
3.62
95.1
0.291
0.291
3.7
4.5
Refinement
Statistics
Diffraction ID
Structure Solution Method
Cross Validation method
Resolution (High)
Resolution (Low)
Number Reflections (Observed)
Number Reflections (R-Free)
Percent Reflections (Observed)
R-Factor (Observed)
R-Work (Depositor)
R-Free (Depositor)
R-Free Selection Details
Mean Isotropic B
X-RAY DIFFRACTION
MAD PHASES FROM A BROMINE WERE COMBINED WITH MAD AND SIRAS PHASES FROM A MERCURY DERIVIATIVE. MLPHARE WAS USED TO CALCULATE THE PHASES WHILE SIGMAA WAS USED TO COMBINE THE THREE PHASES SETS.