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Human wild-type LONP1 bound to PZL-26
Refinement RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 30.066 r_long_range_B_other 30.066 r_scangle_other 22.288 r_mcangle_it 18.276 r_mcangle_other 18.275 r_scbond_other 13.378 r_scbond_it 13.377 r_dihedral_angle_3_deg 11.821 r_mcbond_it 11.684 r_mcbond_other 11.683
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 30.066 r_long_range_B_other 30.066 r_scangle_other 22.288 r_mcangle_it 18.276 r_mcangle_other 18.275 r_scbond_other 13.378 r_scbond_it 13.377 r_dihedral_angle_3_deg 11.821 r_mcbond_it 11.684 r_mcbond_other 11.683 r_dihedral_angle_1_deg 7.327 r_dihedral_angle_2_deg 5.075 r_angle_refined_deg 1.57 r_angle_other_deg 0.535 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_gen_planes_other 0.001 r_bond_other_d r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Recombinant human LONP1 expressed in bacterial cells, E. coli (Rosetta pLyss).
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 209371 Reported Resolution (Å) 3 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 40.4
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 400 Maximum Defocus (nm) 2800 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Scipion 3.0.9 RECONSTRUCTION RELION 3.0.9
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION