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Structure of the occluded-state soluble domain of human Adenylyl cyclase 9 in complex with stimulatory G protein, ATPalphaS, and forskolin
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details in silico model AlphaFold AF-O60503-F1-v6 experimental model PDB 6R3Q
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 7.121 f_angle_d 0.453 f_chiral_restr 0.04 f_plane_restr 0.003 f_bond_d 0.002
Sample Human Adenylyl Cyclase 9 in complex with
Guanine nucleotide-binding protein G(s) subunit alpha Sample Components Human Adenylyl Cyclase 9 Guanine nucleotide-binding protein G(s) subunit alpha
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 189672 Reported Resolution (Å) 3.19 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (6r3q) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC CTF CORRECTION cryoSPARC MODEL FITTING Coot MODEL REFINEMENT PHENIX RECONSTRUCTION cryoSPARC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE