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Insights from crystal and solution structures of mouse UfSP1
Crystallization Crystal Properties Matthews coefficient Solvent content 2.27 45.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.704 α = 90 b = 71.704 β = 90 c = 209.228 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2007-04-02 M SINGLE WAVELENGTH 2 1 x-ray 2007-04-02 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 4A 1.0 PAL/PLS 4A 2 SYNCHROTRON PAL/PLS BEAMLINE 4A 0.979512, 0.979628, 0.971834 PAL/PLS 4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.7 50 0.086 25883
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.7 40 22028 1187 99.79 0.18788 0.18577 0.1951 0.22727 0.2295 RANDOM 23.172
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.06 0.03 0.06 -0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.328 r_dihedral_angle_4_deg 21.398 r_dihedral_angle_3_deg 14.151 r_rigid_bond_restr 5.74 r_dihedral_angle_1_deg 5.047 r_scangle_it 4.874 r_scbond_it 4.864 r_sphericity_free 4.633 r_sphericity_bonded 3.093 r_mcangle_it 2.451
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.328 r_dihedral_angle_4_deg 21.398 r_dihedral_angle_3_deg 14.151 r_rigid_bond_restr 5.74 r_dihedral_angle_1_deg 5.047 r_scangle_it 4.874 r_scbond_it 4.864 r_sphericity_free 4.633 r_sphericity_bonded 3.093 r_mcangle_it 2.451 r_mcbond_it 1.489 r_angle_refined_deg 1.367 r_nbtor_refined 0.305 r_symmetry_vdw_refined 0.224 r_nbd_refined 0.205 r_symmetry_hbond_refined 0.165 r_xyhbond_nbd_refined 0.133 r_chiral_restr 0.114 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1598 Nucleic Acid Atoms Solvent Atoms 111 Heterogen Atoms
Software Software Software Name Purpose HKL-2000 data collection SOLVE phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling