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Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.6 30% PEG4000, 100MM SODIUM CITRATE, PH5.6, 200MM AMMONIUM ACETATE, 30MG/ML GLYCEROL-PHOSPHATE
Crystal Properties Matthews coefficient Solvent content 2.2 44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.817 α = 90 b = 57.133 β = 90 c = 160.631 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 41.1 99.9 0.08 6.4 3.5 46744 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.7 41.1 46744 2512 99.8 0.17 0.168 0.167 0.205 0.2022 RANDOM 15.34
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.52 0.59 -0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.325 r_dihedral_angle_4_deg 18.87 r_dihedral_angle_3_deg 12.331 r_dihedral_angle_1_deg 5.783 r_scangle_it 3.094 r_scbond_it 2.036 r_angle_refined_deg 1.28 r_mcangle_it 1.16 r_mcbond_it 0.777 r_nbtor_refined 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.325 r_dihedral_angle_4_deg 18.87 r_dihedral_angle_3_deg 12.331 r_dihedral_angle_1_deg 5.783 r_scangle_it 3.094 r_scbond_it 2.036 r_angle_refined_deg 1.28 r_mcangle_it 1.16 r_mcbond_it 0.777 r_nbtor_refined 0.31 r_nbd_refined 0.197 r_symmetry_vdw_refined 0.141 r_symmetry_hbond_refined 0.128 r_xyhbond_nbd_refined 0.122 r_chiral_restr 0.088 r_bond_refined_d 0.012 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3448 Nucleic Acid Atoms Solvent Atoms 441 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling