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Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.6 30% PEG4000, 100MM SODIUM CITRATE, PH5.6, 200MM AMMONIUM ACETATE
Crystal Properties Matthews coefficient Solvent content 2.2 44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.214 α = 90 b = 57.123 β = 90 c = 159.452 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD MARRESEARCH M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX10.1 0.98, 0.9794, 0.9797, 0.9717 SRS PX10.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 30.03 94.1 0.06 5.7 6.1 119440 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT NONE 1.2 30.03 119440 6347 93.3 0.171 0.171 0.1705 0.185 0.1855 RANDOM 15.31
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.32 0.35 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.716 r_dihedral_angle_4_deg 16.352 r_dihedral_angle_3_deg 10.851 r_dihedral_angle_1_deg 5.444 r_scangle_it 2.304 r_scbond_it 1.555 r_angle_refined_deg 1.143 r_mcangle_it 0.963 r_mcbond_it 0.602 r_nbtor_refined 0.312
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.716 r_dihedral_angle_4_deg 16.352 r_dihedral_angle_3_deg 10.851 r_dihedral_angle_1_deg 5.444 r_scangle_it 2.304 r_scbond_it 1.555 r_angle_refined_deg 1.143 r_mcangle_it 0.963 r_mcbond_it 0.602 r_nbtor_refined 0.312 r_nbd_refined 0.188 r_symmetry_vdw_refined 0.15 r_chiral_restr 0.083 r_xyhbond_nbd_refined 0.076 r_symmetry_hbond_refined 0.059 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3450 Nucleic Acid Atoms Solvent Atoms 560 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling