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Unique ligand binding specificity of a family 32 Carbohydrate-Binding Module from the Mu toxin produced by Clostridium perfringens
Crystallization Crystal Properties Matthews coefficient Solvent content 1.88 34.23
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.325 α = 90 b = 61.847 β = 90 c = 82.993 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113.15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 19.74 99.1 0.06 15.7 7.08 109314 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.45 91.6 0.38 3.2 4.16
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIR THROUGHOUT NONE 1.45 20 49260 2651 99.7 0.176 0.174 0.1825 0.226 RANDOM 12.19
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 0.48 -0.44
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.884 r_dihedral_angle_3_deg 11.007 r_dihedral_angle_4_deg 6.448 r_dihedral_angle_1_deg 6.289 r_scangle_it 3.587 r_scbond_it 2.685 r_mcangle_it 1.796 r_angle_refined_deg 1.46 r_mcbond_it 1.233 r_angle_other_deg 0.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.884 r_dihedral_angle_3_deg 11.007 r_dihedral_angle_4_deg 6.448 r_dihedral_angle_1_deg 6.289 r_scangle_it 3.587 r_scbond_it 2.685 r_mcangle_it 1.796 r_angle_refined_deg 1.46 r_mcbond_it 1.233 r_angle_other_deg 0.82 r_symmetry_vdw_refined 0.205 r_nbd_other 0.201 r_nbd_refined 0.196 r_symmetry_vdw_other 0.193 r_xyhbond_nbd_refined 0.187 r_nbtor_refined 0.177 r_symmetry_hbond_refined 0.162 r_chiral_restr 0.107 r_nbtor_other 0.084 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2192 Nucleic Acid Atoms Solvent Atoms 498 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement