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Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis at pH 5.5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 pH 5.5
Crystal Properties Matthews coefficient Solvent content 2.1 40.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.718 α = 90 b = 83.596 β = 90 c = 33.638 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS 2006-06-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7A EMBL/DESY, HAMBURG BW7A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.05 15 98.8 0.03 11.3 2.7 97914
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.05 1.1 99.2 0.41 2.7 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER FREE R-VALUE 1.05 6 97463 4873 98.8 0.1328 0.1314 0.1461 0.1875 0.1894 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 81 1634 2062.17
RMS Deviations Key Refinement Restraint Deviation s_approx_iso_adps 0.1 s_zero_chiral_vol 0.088 s_non_zero_chiral_vol 0.08 s_similar_adp_cmpnt 0.06 s_anti_bump_dis_restr 0.046 s_angle_d 0.035 s_from_restr_planes 0.0286 s_bond_d 0.014 s_rigid_bond_adp_cmpnt 0.005 s_similar_dist
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1706 Nucleic Acid Atoms Solvent Atoms 387 Heterogen Atoms 4
Software Software Software Name Purpose SHELXL-97 refinement XDS data reduction XSCALE data scaling