X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.51.8M AMMONIUM SULPHATE, 15MM COBALT CHLORIDE, 0.1M MES PH6.5, pH 6.50
Crystal Properties
Matthews coefficientSolvent content
3.3162.88

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 138.503α = 90
b = 138.503β = 90
c = 68.358γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2006-12-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SASLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1256.081000.115.710.24547828.17
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.111000.73.210.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1DSY2504318022951000.1720.1710.205RANDOM31.14
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.01-1.012.03
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.544
r_dihedral_angle_3_deg11.536
r_dihedral_angle_4_deg10.32
r_scangle_it7.114
r_dihedral_angle_1_deg6.647
r_scbond_it5.311
r_mcangle_it3.072
r_mcbond_it2.401
r_angle_refined_deg1.313
r_angle_other_deg0.847
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.544
r_dihedral_angle_3_deg11.536
r_dihedral_angle_4_deg10.32
r_scangle_it7.114
r_dihedral_angle_1_deg6.647
r_scbond_it5.311
r_mcangle_it3.072
r_mcbond_it2.401
r_angle_refined_deg1.313
r_angle_other_deg0.847
r_symmetry_vdw_refined0.244
r_nbd_other0.199
r_symmetry_vdw_other0.199
r_nbd_refined0.196
r_nbtor_refined0.171
r_symmetry_hbond_refined0.168
r_xyhbond_nbd_refined0.145
r_nbtor_other0.094
r_chiral_restr0.076
r_bond_refined_d0.013
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3410
Nucleic Acid Atoms
Solvent Atoms392
Heterogen Atoms189

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing