2TOB
SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | D(2)O/H(2)O | 10mM NA(2)HPO(4) | 6.1 | 298 | |||
2 | COSY | D(2)O/H(2)O | 10mM NA(2)HPO(4) | 6.1 | 298 | |||
3 | HMQCNULL | D(2)O/H(2)O | 10mM NA(2)HPO(4) | 6.1 | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
2 | Varian | UNITYPLUS | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DISTANCE-RESTRAINED MOLECULAR DYNAMICS | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | LOWEST NOE AND TOTAL ENERGY |
Conformers Calculated Total Number | 40 |
Conformers Submitted Total Number | 13 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | D2O: 2D NOESY (50MS,120MS,200MS,300MS MIXING TIMES), PHASE-SENSITIVE COSY, TOCSY, 1H-13C HSQC, 3D NOESY-HMQC (120MS, 300MS MIXING TIMES), 3D HCCH-COSY, 3D HCCH-TOCSY (65MS), 2D HP CORRELATION, C13 FILTERED NOESY |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | BRUNGER |
2 | structure solution | VARIAN VNMR | VNMR |