2RRN
Solution structure of SecDF periplasmic domain P4
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D 1H-15N NOESY | 1mM [U-13C; U-15N] P4 domain; 20mM TRIS; 50mM sodium chloride; 90% H2O/10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 303 | |
| 2 | 3D 1H-13C NOESY | 1mM [U-13C; U-15N] P4 domain; 20mM TRIS; 50mM sodium chloride; 90% H2O/10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 303 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| Energy Minimization | TopSpin | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | all calculated structures submitted |
| Conformers Calculated Total Number | 20 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | TopSpin | Bruker Biospin | |
| 2 | chemical shift assignment | Sparky | Goddard | |
| 3 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 4 | structure solution | TALOS | Cornilescu, Delaglio and Bax | |
| 5 | structure solution | ProcheckNMR | Laskowski and MacArthur | |
| 6 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
