☰ Navigation Tabs
Structure of the dual enzyme Ire1 reveals the basis for catalysis and regulation of non-conventional splicing
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 294 50mM Tris-Cl (pH 8.0), 200mM
KOAc, 50mM SrOAc, 10mM MgCl2 and 10% PEG 8K
, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 4.29 71.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 130.307 α = 90 b = 130.307 β = 90 c = 175.011 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2006-03-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.97883 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 50 100 0.061 7.2 43.4 66131 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 3.11 100 0.31 8.1 6.1 6634
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.4 19.83 62174 3326 100 0.22443 0.22217 0.2236 0.26637 0.2662 RANDOM 35.687
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 -0.03 -0.05 0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.848 r_dihedral_angle_4_deg 25.585 r_dihedral_angle_3_deg 20.362 r_dihedral_angle_1_deg 9.087 r_scangle_it 5.695 r_scbond_it 3.75 r_angle_refined_deg 2.495 r_mcangle_it 2.433 r_mcbond_it 1.324 r_nbtor_refined 0.316
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.848 r_dihedral_angle_4_deg 25.585 r_dihedral_angle_3_deg 20.362 r_dihedral_angle_1_deg 9.087 r_scangle_it 5.695 r_scbond_it 3.75 r_angle_refined_deg 2.495 r_mcangle_it 2.433 r_mcbond_it 1.324 r_nbtor_refined 0.316 r_symmetry_hbond_refined 0.25 r_nbd_refined 0.246 r_metal_ion_refined 0.231 r_chiral_restr 0.23 r_symmetry_vdw_refined 0.178 r_xyhbond_nbd_refined 0.133 r_bond_refined_d 0.029 r_gen_planes_refined 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6414 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 58
Software Software Software Name Purpose REFMAC refinement HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling SHELXS phasing