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Crystal structure of flavin-containing monooxygenase PhzS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 batch under oil 298 19% PEG400, 0.1M ammonium nitrate, 0.1M sodium acetate, batch under oil, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.13 42.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.5 α = 90 b = 64.86 β = 90 c = 182.02 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-06-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 0.9792 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 30 96.7 0.088 23.2 12.8 15245 14742 42.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.49 80.3 0.272 5.2 8.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.4 20 15108 14318 725 94.77 0.19706 0.19369 0.1946 0.26177 0.2566 RANDOM 33.461
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.62 2.94 -1.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.132 r_dihedral_angle_3_deg 19.605 r_dihedral_angle_4_deg 18.321 r_dihedral_angle_1_deg 6.837 r_scangle_it 3.518 r_scbond_it 2.145 r_angle_refined_deg 1.7 r_mcangle_it 1.472 r_mcbond_it 1.022 r_nbtor_refined 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.132 r_dihedral_angle_3_deg 19.605 r_dihedral_angle_4_deg 18.321 r_dihedral_angle_1_deg 6.837 r_scangle_it 3.518 r_scbond_it 2.145 r_angle_refined_deg 1.7 r_mcangle_it 1.472 r_mcbond_it 1.022 r_nbtor_refined 0.31 r_symmetry_vdw_refined 0.228 r_nbd_refined 0.214 r_xyhbond_nbd_refined 0.168 r_symmetry_hbond_refined 0.137 r_chiral_restr 0.112 r_bond_refined_d 0.015 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2887 Nucleic Acid Atoms Solvent Atoms 54 Heterogen Atoms 53
Software Software Software Name Purpose REFMAC refinement ADSC data collection HKL-2000 data reduction HKL-2000 data scaling SHELXCD phasing SHELXE model building