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ABC-transporter choline binding protein in complex with choline
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 277 0.1M Na acetate pH 4.6, 18% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 1.94 36.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.796 α = 90 b = 185.414 β = 91.83 c = 42.529 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE MAR scanner 345 mm plate 2005-04-26 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 1.05 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 20 0.045 14.1 37385
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 20 31972 1687 90.24 0.18172 0.17959 0.22242 0.2568 RANDOM 18.994
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.03 0.11 -1.62 1.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.207 r_dihedral_angle_4_deg 15.323 r_dihedral_angle_3_deg 14.639 r_dihedral_angle_1_deg 5.369 r_scangle_it 1.312 r_angle_refined_deg 1.05 r_scbond_it 0.832 r_mcangle_it 0.523 r_mcbond_it 0.325 r_nbtor_refined 0.296
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.207 r_dihedral_angle_4_deg 15.323 r_dihedral_angle_3_deg 14.639 r_dihedral_angle_1_deg 5.369 r_scangle_it 1.312 r_angle_refined_deg 1.05 r_scbond_it 0.832 r_mcangle_it 0.523 r_mcbond_it 0.325 r_nbtor_refined 0.296 r_nbd_refined 0.187 r_symmetry_vdw_refined 0.156 r_symmetry_hbond_refined 0.137 r_xyhbond_nbd_refined 0.106 r_chiral_restr 0.076 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4384 Nucleic Acid Atoms Solvent Atoms 269 Heterogen Atoms 14
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction MOLREP phasing