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CRYSTAL STRUCTURE OF A PUTATIVE ATPASE (CHU_0153) FROM CYTOPHAGA HUTCHINSONII ATCC 33406 AT 2.00 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.54 277 NANODROP, 0.2M Sodium chloride, 50.0% PEG 200, 0.1M Na/K phosphate pH 6.54, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.83 56.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 120.78 α = 90 b = 120.78 β = 90 c = 51.17 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat mirror (vertical focusing) 2007-07-01 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.91837, 0.97929, 0.97905 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 29.013 99.3 0.049 13.75 7.35 28915 34.26
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 95.4 0.519 2.57
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 29.013 28893 1470 99.88 0.185 0.185 0.184 0.218 0.2627 RANDOM 35.333
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.65 -0.33 -0.65 0.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.077 r_dihedral_angle_4_deg 15.395 r_dihedral_angle_3_deg 12.096 r_scangle_it 7.653 r_scbond_it 5.442 r_dihedral_angle_1_deg 3.856 r_mcangle_it 3.133 r_mcbond_it 1.993 r_angle_refined_deg 1.702 r_angle_other_deg 1.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.077 r_dihedral_angle_4_deg 15.395 r_dihedral_angle_3_deg 12.096 r_scangle_it 7.653 r_scbond_it 5.442 r_dihedral_angle_1_deg 3.856 r_mcangle_it 3.133 r_mcbond_it 1.993 r_angle_refined_deg 1.702 r_angle_other_deg 1.304 r_mcbond_other 0.491 r_nbd_refined 0.184 r_xyhbond_nbd_refined 0.176 r_nbtor_refined 0.169 r_symmetry_vdw_other 0.169 r_symmetry_hbond_refined 0.157 r_nbd_other 0.14 r_chiral_restr 0.101 r_symmetry_vdw_refined 0.093 r_nbtor_other 0.083 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2585 Nucleic Acid Atoms Solvent Atoms 111 Heterogen Atoms 99
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building XSCALE data scaling PDB_EXTRACT data extraction MAR345 data collection XDS data reduction SHELXD phasing autoSHARP phasing