2R15

Crystal structure of the myomesin domains 12 and 13


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52920.16M CH3COONH4, 14% (W/V) PEG 20000, pH 7.50, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties
Matthews coefficientSolvent content
2.9658.48

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 61.504α = 90
b = 87.87β = 90
c = 203.081γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2004-05-14MMAD
21100
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X110.8126, 0.91837, 0.8126EMBL/DESY, HAMBURGX11
2SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7A0.98214, 0.98264, 0.91837EMBL/DESY, HAMBURGBW7A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.242095.70.0769.94.925757
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.242.2893.20.3824.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.2419.87256976831000.1960.223RANDOM44.68
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.582.09-0.51
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.155
r_dihedral_angle_4_deg22.087
r_dihedral_angle_3_deg16.339
r_dihedral_angle_1_deg6.401
r_scangle_it6.192
r_scbond_it4.099
r_mcangle_it2.442
r_mcbond_it1.506
r_angle_refined_deg1.38
r_nbtor_refined0.305
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.155
r_dihedral_angle_4_deg22.087
r_dihedral_angle_3_deg16.339
r_dihedral_angle_1_deg6.401
r_scangle_it6.192
r_scbond_it4.099
r_mcangle_it2.442
r_mcbond_it1.506
r_angle_refined_deg1.38
r_nbtor_refined0.305
r_symmetry_hbond_refined0.263
r_nbd_refined0.219
r_symmetry_vdw_refined0.188
r_xyhbond_nbd_refined0.161
r_chiral_restr0.096
r_bond_refined_d0.012
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3209
Nucleic Acid Atoms
Solvent Atoms247
Heterogen Atoms22

Software

Software
Software NamePurpose
CNSrefinement
REFMACrefinement
MAR345data collection
DENZOdata reduction
SCALEPACKdata scaling
CNSphasing