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Structure of an early-microsecond photolyzed state of CO-bjFixLH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9 293 4M NaCl, 50mM CAPSO, 1% PEI, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.54 65.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 128.5 α = 90 b = 128.5 β = 90 c = 58.4 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 neutron 287 CCD MAR CCD 165 mm 2002-04-17 L LAUE 2 1 neutron 287 CCD MAR CCD 165 mm 2002-08-12 L LAUE 3 1 neutron 287 CCD MAR CCD 165 mm 2002-12-13 L LAUE
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-ID-B 0.8-1.5 APS 14-ID-B 2 SYNCHROTRON APS BEAMLINE 14-ID-B 0.8-1.5 APS 14-ID-B 3 SYNCHROTRON APS BEAMLINE 14-ID-B 0.8-1.5 APS 14-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3 2.5 32.1 6485 5980
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.5 32.1 5980 291 95.81 0.24069 0.23803 0.30065 RANDOM 95.5
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.12 0.06 0.12 -0.19
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.201 r_dihedral_angle_4_deg 21.748 r_dihedral_angle_3_deg 21.04 r_dihedral_angle_1_deg 7.341 r_scangle_it 5.641 r_scbond_it 3.391 r_angle_refined_deg 2.433 r_mcangle_it 2.106 r_mcbond_it 1.11 r_symmetry_hbond_refined 0.454
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.201 r_dihedral_angle_4_deg 21.748 r_dihedral_angle_3_deg 21.04 r_dihedral_angle_1_deg 7.341 r_scangle_it 5.641 r_scbond_it 3.391 r_angle_refined_deg 2.433 r_mcangle_it 2.106 r_mcbond_it 1.11 r_symmetry_hbond_refined 0.454 r_nbtor_refined 0.322 r_nbd_refined 0.257 r_symmetry_vdw_refined 0.256 r_xyhbond_nbd_refined 0.214 r_chiral_restr 0.131 r_bond_refined_d 0.023 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 920 Nucleic Acid Atoms Solvent Atoms 81 Heterogen Atoms 43
Software Software Software Name Purpose REFMAC refinement