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Crystal structure of m157 from mouse cytomegalovirus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6 293 100mM MES pH 6.0, 200mM ammonium acetate, 35% PEG400, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.49 50.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 120.028 α = 90 b = 43.805 β = 101.52 c = 62.321 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.1 ALS 8.2.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 50 99.8 0.054 15.2 3.3 18770 34
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.21 99.8 0.359 3.6 3.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 2.1 50 23419 17796 967 99.67 0.21507 0.21366 0.2107 0.24028 0.2247 RANDOM 36.904
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.74 0.28 1.3 -0.45
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.956 r_dihedral_angle_4_deg 18.459 r_dihedral_angle_3_deg 12.436 r_dihedral_angle_1_deg 4.277 r_scangle_it 4.059 r_scbond_it 3.107 r_mcangle_it 1.884 r_mcbond_it 1.473 r_angle_refined_deg 1.26 r_nbtor_refined 0.309
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.956 r_dihedral_angle_4_deg 18.459 r_dihedral_angle_3_deg 12.436 r_dihedral_angle_1_deg 4.277 r_scangle_it 4.059 r_scbond_it 3.107 r_mcangle_it 1.884 r_mcbond_it 1.473 r_angle_refined_deg 1.26 r_nbtor_refined 0.309 r_nbd_refined 0.224 r_symmetry_vdw_refined 0.223 r_symmetry_hbond_refined 0.194 r_xyhbond_nbd_refined 0.154 r_chiral_restr 0.074 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1879 Nucleic Acid Atoms Solvent Atoms 121 Heterogen Atoms 52
Software Software Software Name Purpose REFMAC refinement SHARP phasing CNS refinement MOSFLM data reduction SCALA data scaling HKL-2000 data collection