NMR Structure of Protein UPF0165 protein AF_2212 from Archaeoglobus Fulgidus; Northeast Structural Genomics Consortium Target GR83
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 4,3D, GFT HNNCABCA | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
| 2 | 4,3D, GFT CABCACoNNH | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
| 3 | 4,3D, GFT HCCH COSY | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
| 4 | 3D, 15N-13C resolved simultanious NOESY | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
| 5 | 3D, 15N, 13C resolved X-filtered NOESY | 1.2 mM protein Y2212_ARCFU, U-15N,13C, 5mM CaCl, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02%NaN3 | 5% D2O, 95% H2O | 100 mM NaCl | 5.5 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 750 |
| 2 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing molecular dynamics | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 20 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | This Structure was determined using recently developed High Throughput NMR structure determination protocol. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | 2.3 | Delaglio et al |
| 2 | data analysis | DYANA | 1.5 | Guntert et al |
| 3 | refinement | CYANA | 2.1 | Guntert et al |
| 4 | refinement | CNS | 1.1 | Brunget et al |














