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Crystal structure of IRAK-4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 6.4 293 2.6 - 2.9 M ammonium sulfate, PH 6.4-7.9, EVAPORATION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.66 53.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 145.303 α = 90 b = 141.292 β = 125.8 c = 88.423 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 90.29 0.09 92544
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 90.29 87894 4644 95.19 0.23665 0.23332 0.2326 0.2988 0.2976 RANDOM 42.518
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.15 3.2 -2.5 3.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.361 r_dihedral_angle_4_deg 22.211 r_dihedral_angle_3_deg 19.178 r_dihedral_angle_1_deg 7.425 r_scangle_it 4.096 r_scbond_it 2.84 r_angle_refined_deg 2.107 r_mcangle_it 2.08 r_mcbond_it 1.298 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.361 r_dihedral_angle_4_deg 22.211 r_dihedral_angle_3_deg 19.178 r_dihedral_angle_1_deg 7.425 r_scangle_it 4.096 r_scbond_it 2.84 r_angle_refined_deg 2.107 r_mcangle_it 2.08 r_mcbond_it 1.298 r_nbtor_refined 0.306 r_symmetry_hbond_refined 0.29 r_symmetry_vdw_refined 0.27 r_nbd_refined 0.241 r_chiral_restr 0.22 r_xyhbond_nbd_refined 0.214 r_bond_refined_d 0.021 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9328 Nucleic Acid Atoms Solvent Atoms 483 Heterogen Atoms 138
Software Software Software Name Purpose REFMAC refinement