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The CC domain structure from the wheat stem rust resistance protein Sr33 challenges paradigms for dimerization in plant NLR proteins
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 2 3D CBCA(CO)NH 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 3 3D HNCACB 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 4 3D HNCO 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 5 3D HCACO 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 6 3D HCCH-COSY 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 7 3D 1H-15N NOESY 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 8 3D 1H-13C NOESY aliphatic 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 9 3D 1H-13C NOESY aromatic 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298 10 3D HBHA(CO)NH 450 uM [U-100% 13C; U-100% 15N] protein, 10 mM HEPES 90% H2O/10% D2O 0 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700 2 Bruker AVANCE 900
NMR Refinement Method Details Software torsion angle dynamics automated NOE assignment CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift calculation CYANA 2.1 Guntert, Mumenthaler and Wuthrich 2 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 3 refinement CYANA 2.1 Guntert, Mumenthaler and Wuthrich 4 geometry optimization TALOS TALOS+ Cornilescu, Delaglio and Bax 5 peak picking CCPNMR 2.4.1 Vranken WF et al. 6 data analysis CCPNMR 2.4.1 Vranken WF et al. 7 processing Rowland_NMR_toolkit 3 JC Hoch et al.