2N9J

Solution structure of oxidized human cytochrome c

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
2	2D 1H-13C HSQC aliphatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
3	3D CBCA(CO)NH	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
4	3D C(CO)NH	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
5	3D HNCO	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
6	3D HNCA	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
7	3D HNCACB	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
8	3D HBHA(CO)NH	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
9	3D HN(CO)CA	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
10	3D HN(CA)HA	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
11	3D HCCH-TOCSY aliphatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
12	3D 1H-15N NOESY	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
13	3D 1H-13C NOESY aliphatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
14	2D 1H-13C HSQC aromatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
15	3D 1H-13C NOESY aromatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
16	2D 1H-13C HSQC aromatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
17	3D HCCH-TOCSY aromatic	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
18	HbCbCgCdHd	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298
19	HbCbCgCdCeHe	0.5-1 mM [U-99% 13C; U-99% 15N] Cyt c-1, 50 mM sodium phosphate-2	95% H2O/5% D2O	50	6.8	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Agilent	INOVA	800
2	Agilent	INOVA	600
3	Agilent	INOVA	600

NMR Refinement
Method	Details	Software
simulated annealing, torsion angle dynamics		VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ		Varian
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	TALOS+		Yang Shen,Frank Delaglio,Gabriel Cornilescu, Ad bax
4	chemical shift assignment	Sparky		Goddard
5	peak picking	Sparky		Goddard
6	refinement	Sparky		Goddard
7	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
8	refinement	CYANA		Guntert, Mumenthaler and Wuthrich