2N17 | pdb_00002n17

NMR structure of a Kazal-type serine protease inhibitor from the subterranean termite defense gland of Coptotermes formosanus Shiraki soldiers

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
2	2D 1H-13C HSQC	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
3	2D 1H-1H NOESY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
4	2D 1H-1H TOCSY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
5	2D 1H-1H COSY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
6	3D 1H-15N NOESY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
7	3D 1H-15N TOCSY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
8	3D HNCACB	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
9	3D HN(COCA)CB	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
10	3D HNCO	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
11	3D HCACO	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
12	3D 1H-13C NOESY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
13	3D HCCH-TOCSY	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298
14	3D HNHB	1 mM [U-99% 13C; U-99% 15N] TFP4	90% H2O/10% D2O	0.12	6.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	VS-700	700

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing		VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ		Agilent
2	processing	NMRPipe	7.8	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	CCPNMR	2.2.2	CCPN
4	peak picking	CCPNMR	2.2.2	CCPN
5	chemical shift assignment	CCPNMR	2.2.2	CCPN
6	noe assignment	CCPNMR	2.2.2	CCPN
7	dihedral angle	CCPNMR	2.2.2	CCPN
8	geometry optimization	CNS	1.2	Brunger, Adams, Clore, Gros, Nilges and Read
9	refinement	CNS	1.2	Brunger, Adams, Clore, Gros, Nilges and Read
10	dihedral angle	TALOS		Cornilescu, Delaglio and Bax
11	structure validation	PSVS	1.5	Bhattacharya and Montelione