2MXL

Structural features of a 3' splice site in influenza A: 39-nt hairpin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.1 mM RNA (39-MER)95% H2O/5% D2O101.126.0ambient293.15
22D 1H-1H NOESY1.1 mM RNA (39-MER)95% H2O/5% D2O101.126.0ambient271.15
32D 1H-1H TOCSY1.1 mM RNA (39-MER)95% H2O/5% D2O101.126.0ambient293.15
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingAmber
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmber11Case, D.A. et al.
2chemical shift assignmentSparkyGoddard
3peak pickingSparkyGoddard
4data analysisSparkyGoddard
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6collectionVNMRVarian