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Atomic-resolution 3D structure of amyloid-beta fibrils: the Osaka mutation
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 NCA 15 mg/mL [U-100% 13C; U-100% 15N] amyloid beta 100% H2O 0 7.0 ambient 283 2 NCO 15 mg/mL [U-100% 13C; U-100% 15N] amyloid beta 100% H2O 0 7.0 ambient 283 3 DARR 15 ms 15 mg/mL [U-100% 13C] amyloid beta 100% H2O 0 7.0 ambient 283 4 PAIN 6 ms 15 mg/mL [U-100% 13C; U-100% 15N] amyloid beta 100% H2O 0 7.0 ambient 283 5 PAIN 6 ms 15 mg/mL [U-100% 13C]/[U-100% 15N] amyloid beta 100% H2O 0 7.0 ambient 283 6 DARR 400 ms 15 mg/mL [U-100% 13C] amyloid beta 100% H2O 0 7.0 ambient 283 7 DARR 400 ms 15 mg/mL [U-100% 13C; U-100% 15N]/natural abundance amyloid beta 100% H2O 0 7.0 ambient 283 8 PAR 8 ms 15 mg/mL [U-100% 13C] amyloid beta 100% H2O 0 7.0 ambient 283 9 PAR 8 ms 15 mg/mL [U-100% 13C; U-100% 15N]/natural abundance amyloid beta 100% H2O 0 7.0 ambient 283 10 CHHC 500 us 15 mg/mL [U-100% 13C] amyloid beta 100% H2O 0 7.0 ambient 283 11 CHHC 500 us 15 mg/mL [U-100% 13C; U-100% 15N]/natural abundance amyloid beta 100% H2O 0 7.0 ambient 283 12 PDSD 4 s 15 mg/mL [U-100% 2-13C-glucose; U-100% 15N] amyloid beta 100% H2O 0 7.0 ambient 283
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 850
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 3.9.6 Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment CcpNMR 2.2.2 CCPN 3 data analysis CcpNMR 2.2.2 CCPN 4 peak picking CcpNMR 2.2.2 CCPN 5 dihedral angle prediction TALOS+ 2.1 Cornilescu, Delaglio and Bax 6 refinement CYANA Guntert, Mumenthaler and Wuthrich