2MSX | pdb_00002msx

The solution structure of the MANEC-type domain from Hepatocyte Growth Factor Inhibitor 1 reveals an unexpected PAN/apple domain-type fold

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310
2	2D 1H-13C HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310
3	3D CBCA(CO)NH	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310
4	3D HNCACB	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310
5	3D HNCO	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310
6	3D HNCA	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310
7	4D HabCab(CO)NH	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
8	4D HCCH-TOCSY	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
9	2D (HB)CB(CGCD)HD	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
10	2D (HB)CB(CGCDCE)HE	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
11	3D HBCB(CGCD)HD	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
12	3D HBCB(CGCDCE)HE	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
13	3D 13C-edited NOESY HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
14	4D 13Cali,13Caro-edited HMQC-NOESY-HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
15	4D 13Cali,13Cali-edited HMQC-NOESY-HMQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
16	4D 15N,13C edited HMQC-NOESY-HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
17	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
18	2D 1H-13C HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
19	3D 1H-15N NOESY	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	298
20	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] protein_1	93% H2O/7% D2O	100	6.5	ambient	310

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	Plus	500
2	Agilent	DDR2	600
3	Agilent	DDR2	800

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing		CYANA

NMR Ensemble Information
Conformer Selection Criteria	all calculated structures submitted
Conformers Calculated Total Number	80
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
2	chemical shift assignment	Sparky		Goddard
3	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	refinement	YASARA2		YASARA2-Krieger
5	processing	SSA_software_package		Stanek, Kosinski, Kozminski