2MMO | pdb_00002mmo

Solution Structure of the oxidised Thioredoxin from Plasmodium falciparum

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] protein-5, 10 mM potassium chloride-6, 1 mM sodium azide-7, 0.1 mM DSS-8	93% H2O/7% D2O		7	ambient	293
2	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] protein-9, 10 mM potassium chloride-10, 1 mM sodium azide-11, 0.1 mM DSS-12	100% D2O		7	ambient	293
3	3D HNCA	1 mM [U-100% 13C; U-100% 15N] protein-5, 10 mM potassium chloride-6, 1 mM sodium azide-7, 0.1 mM DSS-8	93% H2O/7% D2O		7	ambient	293
4	3D HNCO	1 mM [U-100% 13C; U-100% 15N] protein-5, 10 mM potassium chloride-6, 1 mM sodium azide-7, 0.1 mM DSS-8	93% H2O/7% D2O		7	ambient	293
5	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] protein-9, 10 mM potassium chloride-10, 1 mM sodium azide-11, 0.1 mM DSS-12	100% D2O		7	ambient	293
6	2D 1H-1H NOESY	1 mM protein-1, 10 mM potassium chloride-2, 1 mM sodium azide-3, 0.1 mM DSS-4	93% H2O/7% D2O		7	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	600
2	Bruker	DRX	800

NMR Refinement
Method	Details	Software
simulated annealing		TopSpin

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	1000
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin		Bruker Biospin
2	processing	TopSpin		Bruker Biospin
3	data analysis	AUREMOL		Bruker Biospin
4	peak picking	AUREMOL		Bruker Biospin
5	data analysis	TALOS		Cornilescu, Delaglio and Bax
6	structure solution	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
7	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read