2ML9 | pdb_00002ml9

Solution structure of YSCUCN in a micellar complex with SDS


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-492% H2O/8% D2O0.126.0ambient310
23D 1H-15N NOESY100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-492% H2O/8% D2O0.126.0ambient310
33D 1H-15N TOCSY100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-492% H2O/8% D2O0.126.0ambient310
43D HNCA100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-492% H2O/8% D2O0.126.0ambient310
53D HN(CO)CA100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-492% H2O/8% D2O0.126.0ambient310
63D HNHA100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-492% H2O/8% D2O0.126.0ambient310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealing, torsion angle dynamicsSIMULATED ANNEALING FROM EXTENDED STRUCTURE, MINIMIZATION IN TORSION ANGLE/CARTESIAN SPACETopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with least restraint violations, followed by selection by lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentANSIGKraulis
4structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
5refinementProcheckNMRLaskowski and MacArthur
6refinementX-PLOR NIH