2MHS
NMR Structure of human Mcl-1
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D 15N/13Caliphatic/13Caromatic-resolved NOESY | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 2 | GFT(4,3)D HNNCabCa | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 3 | GFT(4,3)DCabCacoNHN | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 4 | GFT(4,3)D HabCabcoNHN | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 5 | GFT(4,3)D HNNCO | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 6 | GFT (4,3)D HCCH | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 7 | 2D 1H-13C HSQC | 0.7 mM [U-5% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 8 | 2D 1H-15N HSQC | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 9 | 2D 1H-13C HSQC | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| 10 | 2D 1H-13C HSQC aromatic | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 750 |
| 2 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry, molecular dynamics, simulated annealing, torsion angle dynamics | VNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | VNMR | Varian | |
| 2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 3 | data analysis | XEASY | Bartels et al. | |
| 4 | chemical shift assignment | AutoAssign | Zimmerman, Moseley, Kulikowski and Montelione | |
| 5 | structure solution | AutoStructure | Huang, Tejero, Powers and Montelione | |
| 6 | data analysis | AutoStructure | Huang, Tejero, Powers and Montelione | |
| 7 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 8 | data analysis | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 9 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 10 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 11 | processing | SPSCAN | Glaser | |
| 12 | data analysis | PSVS | Bhattacharya and Montelione | |
