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Solution structure of Ani s 5 Anisakis simplex allergen
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 2 2D 1H-13C HSQC 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 3 3D HNCO 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 4 3D HNCA 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 5 3D HN(CO)CA 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 6 3D CBCA(CO)NH 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 7 3D HNCACB 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 8 3D HCCH-TOCSY 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 9 3D 1H-13C NOESY aliphatic 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 10 2D 1H-13C HSQC aromatic 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 11 3D 1H-15N NOESY 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298 12 3D 1H-15N TOCSY 0.5 mM [U-13C; U-15N] Ani s 5-1 90% H2O/10% D2O 3.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, energy minimization CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 2 refinement Amber 9 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman 3 refinement CYANA